i'm sure you'll be fine. if you're a ny resident and your numbers are halfway decent, the suny schools will eat your app up. i really get the impression that suny med schools love ny residents who've attended suny undergrads much more than ny residents who went to private or out-of-state undergrads. i was recently at suny downstate for an interview and both of my tour guides had gone to stony brook for undergrad and they said that there were tons of kids from suny schools at downstate. best of luck.