The red flags won't be a problem. As you can expect, your highest chances will be with ALL of the TX schools, but Baylor will be the hardest nut to crack. Forget the UCs except maybe UCSD and UCI
I suggest:
Baylor
UT San Antonio
Galveston
UT Houston
A&M
Texas Tech
Texas Tech El Paso
UT Southwestern
USC
Loma Linda (have you read their list of don'ts?)
UMiami
UColorado
Tulane
NYMC
SUNY Downstate
SUNY Stony Brook
Hofstra
Pitt
Vanderbilt
NYU
U AZ
Columbia
Cornell
Mt. Sinai
Einstein
U So FL
Any other new MD school
Loyola
BU