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I can't speak to Kaplan's method, as I took TPR, but I think they have similar mapping strategies. I found that when I used them, I was paying more attention to what phrases and words I should be looking for (e.g. names, dates, contradictions, strong statements, etc.) and less about comprehending what I was reading. I would read- or what I *thought* was reading, but really it was more just skimming for the key phrases and concepts they told us to look for- and as soon as I saw something I thought was important, I would mark it and move on without actually understanding what I just circled. I just knew it was important. Does that make sense?
I think it gives you a false sense of accomplishing something. It's like if someone just threw a baseball at your head and you're thinking, "Ok.. ****... this is going to hit me and I need to figure out what to do... let me take a minute to calculate its velocity, taking into account the curvature on the speed ball, carry the two-" *WHACK* Well, dummy, if you'd just looked and taken a micro second to use common sense and ducked, you would have been fine *and* saved yourself a lot of time and unnecessary effort.
In other words, I think the strategies detract from what you should be focusing on and that's reading for overall understanding. It's not reading for buzzwords.
When I just read straight through and stay focused on what I'm reading, I find that I have a better grasp of the overall theme *and* the subtleties of the passage. Using the mapping method kind of just gives you the former, I think. Plus it takes so much time. Again, reading straight through I am finishing with 10-15 minutes left and am scoring 12ishs.
Hope that helps! Good luck!