Wait, are you saying you are missing a semester of lab only or are you missing Gen Chem II and the lab for II?
If you are missing both, then you may be hurting, unless you have taken Biochem or some other chemistry other than Organic I and II. If you have taken something else, the schools may take that in its place. However if you haven't, you may have to take Gen chemII with lab.
How did you go on to Organic without having a yr of Gen chem?