So what's biology lab benchwork really like?

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manchestercity

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Hi,

I am just curious what kind of basic procedures are performed by undergrads in biology lab. When my faculty researchers were interviewing me for research positions and i told them that I have always been excellent in lab classes, they smiled and told me that the only relevant thing I learned that would be useful for research is pippetting. Is this true? Is lab research so vastly different than undergrad course lab? I haven't started yet the benchwork aspect of research , but I'm curious about what it's like.

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Hi,

I am just curious what kind of basic procedures are performed by undergrads in biology lab. When my faculty researchers were interviewing me for research positions and i told them that I have always been excellent in lab classes, they smiled and told me that the only relevant thing I learned that would be useful for research is pippetting. Is this true? Is lab research so vastly different than undergrad course lab? I haven't started yet the benchwork aspect of research , but I'm curious about what it's like.

Well, for me it began with DNA cloning into a plasmid (PCR, DNA gels, restriction enzymes, etc), transforming bacteria, selecting with antibiotic, colony PCR, confirming DNA sequences, producing a virus, infecting a cell line with said virus, immunoprecipitation using beads, western blot....

The only similar thing I did in bio lab was micro-pipetting, and I think I did a DNA gel once. So yeah, it was mostly true for me. 🙂
 
Busy work followed by more busy work.
 
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Well, for me it began with DNA cloning into a plasmid (PCR, DNA gels, restriction enzymes, etc), transforming bacteria, selecting with antibiotic, colony PCR, confirming DNA sequences, producing a virus, infecting a cell line with said virus, immunoprecipitation using beads, western blot....

The only similar thing I did in bio lab was micro-pipetting, and I think I did a DNA gel once. So yeah, it was mostly true for me. 🙂


My experience is very similar to that. To summarize:

Biochemistry/Molecular Biology
-PCR Prep/PCR
-Making Gels (for gel electrophoresis)
-Running Gels
-Analyzing Gels
-Extraction from Gels, purification of product, imaging
-Restriction Digest
-Ligation
-Western Blots
-Using computer programs to create cloning strategies
-Lysing cells to collect their DNA, these are called minipreps, midipreps, maxipreps, etc..

Tissue Culture/Cell Work
-Cell passaging (in our lab we refer to it as cell splitting)
-Bacterial transformation
-Transfection
-Transduction
-Cell freezing
-Thinking up and making cell co-culture experiments
-Cell counting

Animal Work
-Anesthesia
-Taking out surgical clippings
-Retro-orbital injections
-Tail vein injections
-IP injections
-Penile vein injections
-Imaging of animals

General laboratory housekeeping
-Unpacking boxes with supplies
-Getting rid of cell waste
-Getting rid of biological/chemical trash
-Ordering and organizing cell media
-Learning how to use core facilities
-Autoclave
-Make new antibiotic agar plates, etc..

Non-technical, SCIENTIFIC work
-Reading papers. Lots and lots of papers.
-Outlining papers.
--Discussing papers.
-Thinking of cloning strategies.
-Thinking of cellular experiments.
-Keeping a GOOD laboratory notebook, writing out experiments/results/conclusions
-Attend weekly lab meetings

Those are some of the things that I did in lab. I know a lot of people who claim to have done "research" or who have worked alongside me (high school students) but expressed no interest in anything, slacked off, read random things on their phones, would occasionally do some "manual" technical work like split cells. They get the benefit of diluting my work by claiming to have done "research" but I would NOT call that research at all.

This makes me wonder about how many people who claim to do "research" actually DO research. Does coming to a lab 4 hours a week and helping run an assay constitute research? This is not a rhetorical question.

I struggle to "define" research. The lab techs in my lab who are magicians and experts with all the technical work don't consider themselves researchers. Sure they know how to troubleshoot a PCR problem or a Western problem, but they claim that because they are not mentally invested in the project, that they are merely doing remedial hand work - no different from cooking, cleaning, or assembling a desk by following a written protocol. Their "talent" or rather, expertise comes from years of experience and troubleshooting. This raises the question: someone who works say 40 hours a week in a lab (and not 4), all they do is help out with little projects by doing cell maintenance and running assays, are they still doing research?
 
Academic lab courses entails guided protocols and results that are pretty varied but generally fall around some expected product (usually measuring yield or purity or general accuracy). You usually have assistance and practice your scientific writing through lab reports, you are really not making a contribution to science by taking an academic lab course.

Bench science first of all is much more fast paced, they run independently of an academic track is much more creative,usually entail some (hopefully) very bright minds who are completely comfortable with scientific writing, primary literature reading, and (most importantly) interpreting data they collect to test their hypothesis as such. When I joined my lab at the School of Medicine, I had no basis of immunology, immunological assays (IHC, FC, WB, RT-PCR, cyrotome, histo), nor did I understand the translational basis for the mice models. It honestly took 40 hrs/week for the entire summer to catch up. After proving myself I now am acclimated to the pace of research (though not a "scientist" by all means) I asked to take on an honors thesis project.

Unless you have prior experience, to understand the entirety of research in a non academic lab will be hard. IMO an undergrad conducting research entails not only being able to conduct assays in support with another, but to be given the responsibility to hold an independent project (usually guided by your PI as an undergrad).

You'll either love or hate working in a non-academic lab.
 
Performing the same stain and wash of growing cancer cells over and over again. That is one reason why I didn't want to allocate so much time to it this semester. However, the above answers seem to be given by people who spent quite a bit more time in lab than I did. 😀
 
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