I took the MCAT in April. I sent in my primary in mid-June -- it took about 3 weeks, probably because they had three schools to confirm grades on and one of the community colleges I had transcripts sent from took forever to send it out. Did you ship your transcrips to them already? That may be what's holding them up -- or also if you took the August MCAT.
I took the august mcat and sent my aacomas in on aug 15 and had recieved secondaries by the 1st of sept.
You can always call them to make sure your application is complete.
They send the MCAT scores later on when they get them.
It took aacomas 4 weeks to verify my transcripts. I emailed them when to see why it took so long, and they said I reversed my last name and first name. After they corrected it they had they had my transcripts verified, and everything sent out in a couple of days.