Thanks everyone for the overwhelming response! At the time I did the OP, I did not expect to get so many different perspectives. I'll answer some questions first and put down my thoughts thereafter.
"I don't mean to be rude so please don't take this the wrong way but how did you end up with those grades and board scores and nearly 12 research publications/projects? I know our school stresses academics, academics, academics and then research so I am just curious."
Thanks for your input Chirurgia magna. I'm sure some of the residency programs' directors would be asking the same question. I'm not certain if the following explanation will do justice but I contribute the inconsistency of my scores on some personal matters. Extenuating circumstances led to postponing my Step I exam by 2 months. Then, I started my family and internal medicine rotations without quite having resolved the issue in the first place. Obviously, the results of the 2 core clerkships were poor and reflective of the poor state-of-mind I was in.
As for the research, I enjoy doing research in general. Unlike creative writing, journal writing comes natural to me. Prior to medical school, I got my masters in public health and held a research job for a couple years. Although I would like to incorporate elements of research to my career down the line, I focused intensely on it with the intention to make up for my poor grades during the 1st semester of my 3rd year. I figured I could not redo Step I or erase NP on my transcripts so the next best thing was to re-channel my strengths to become a more prolific med student in the realm of investigative work.
"What happened during those two failed rotations? Did you have extenuating circumstances or just didn't study hard enough for the shelf?"
Thanks Buzz me for your question. Without going to specific details, I did have some extenuating circumstances during that phase of my 3rd year which negatively affected my academic performance. I'll definitely explicate the situation on my personal statement when it's time to apply ERAS. Luckily, I have a physician mentor who saw me through this entire process. I'm hoping his LOR will depict my positive work ethic and perseverance as opposed to a poor grades alone. However, I'm not sure how much leeway room I'll have. At the end of the day, it seems like it all comes down to the numbers...
"Are you at the University of Michigan? If not, MD or DO? This will make a very big difference, especially if you're in the former category."
Thanks Guile for your comment. I'm at Michigan state MD program. Other than campus notoriety, I'm not sure if this will positively or negatively affect my chances. I'd appreciate it if you can further comment on this.