It's not really that complicated. There a lot of helpful tutorials on you tube that go over deck organization, how to change deck settings (new cards per day ect...), "tagging" cards with what lecture/subject they belong to and using image occlusion (the add on that allows you to screen shot a picture from your anatomy text and quiz yourself on structures). If you understand these things, I think you're in good shape. Personally, I've found Anki VERY helpful for anything that involves route memorization (so far anatomy, radiology and neuro structures). I have not used it as much for lecture material.
(for organization)
(for image occlusion)