I’m in an ASD research lab. From a neuropsych genetics standpoint (which is more of my area), ASD seems to primarily be related to ADHD and schizophrenia. However, many disorders and medical diseases are often comorbid (or run in the family) including autoimmune diseases and GI issues.
As far as I know, ASD is recognized by most researchers in the field to essentially be multiple disorders (hence the spectrum idea and combining of multiple diagnoses) with similar symptoms but multifactorial causes. For example, although PTEN is a gene associated with some cases of ASD, no one “ASD gene” has been found because there are different causes of different presentations.
As for the study, I actually attended a genetics of ASD lecture a few months ago and heard some similar findings. When someone asked why the “cause” of ASD is so hard to find and why there are conflicting research results, the presenter’s opinion was essentially what I mentioned earlier about there being different causes of different presentations of ASD (e.g., a kid macrocephaly and ID with no family history vs. one with above average intelligence, “quirkiness” regarding routines, and a family history of similar issues).