I've never heard of getting a PharmD without getting a BS/BA first, at least for American students, but it does help explain your timeline. Since I have no experience dealing with your situation, I won't try to guess how different schools might react, even mine. But my advice as someone who applied to med school with a nontraditional academic record (no grades, no GPA, no credit hours even) is that you check the policy of every school to which you're considering applying. If School A's website says you absolutely must have a BS/BA, then take that school off your list. If School B says that a BS/BA is preferred but they will consider exceptions on a case by case basis, then contact School B and find out if your situation qualifies. If there is no info on the website for School C, then again, contact them and ask.
As you've already suggested, this is the time to be proactive and practical, not griping on SDN. You found out about this issue early enough to change your app strategy if necessary, and if you aren't properly credentialed to be admitted to your state school, then don't apply there. (Or, if you've already submitted your app, then consider adding a different school to replace them.) But not meeting the requirements of certain schools doesn't mean that other schools won't be perfectly willing to consider you. Get all of the info you need first, and then you will know how best to proceed from there.
