Which if any of those schools would you be re-applying for?
I will fully admit I skimmed through most of the wall of text above and scrolled down to the re-application — can you break out your clinical and non-clinical hours by activity so we can see what you're trying to count where?
Finally, do you have any shadowing? You need at least 50 hours at most schools, ideally with some of those being with a PCP.
This is just to get things going, will give more detailed advice upon further reading