Help with figure (heat map / ?clustering)

[mark-ER]

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Research peeps:

I am writing up a paper about NGS in advanced/metastatic cancers ... rather than presenting the data as a long-a$$ run-of-the-mill table, I would like to put together a figure similar to this:

http://www.translational-medicine.com/content/12/1/299/figure/F1

There must be a dedicated software or at least a plug-in module (Excel, matlab) that would allow me to create a figure like this. Something GUI would be best; I think having an option of further analysis (hierarchical clustering, PCA, etc) would be great, but not absolutely necessary for the journals I hope to target. I hope I do not have to brush off the dust from my R programming days,Thanks for you assistance.

 

[Fencer]

Here is the correct link: http://www.translational-medicine.com/content/12/1/299/figure/F1 (the link above has tabs to a particular institution in the NE)

 

[haanman]

Maybe the cBioPortal oncoprinter? http://www.cbioportal.org/tools.jsp

If you need to do more with the data though, I do think R is the best way.

 

[Stannis_the_Mannis]

I think R is the best way to go. You're gonna need this

 

[Neuronix]

I'd use R Studio with Bioconductor