The problem is that most schools will not accept you if you are already in a PhD program unless you make it clear that you will be finished with the degree prior to matriculation in August 06. Youre going to have to decide whether to delay applying until after the PhD or make a clean break with the the PhD program and reapply for the 05 AmCAS.
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this is true for many adcoms. they don't like "poaching" other graduate programs. also, the fact that you are in a phd program, but applying to an md program raises some questions like... "why is he trying to jump ship?", "if he bails on the phd, will he then bail on the md for something else?". adcoms may question your sincerity about wanting to become a physician.
it sounds like you are not really interested on the phd program. it sounds like you are just doing this to get in to medical school. if that is the case, then quit the program, and move on. if you are truly interested in the phd, then complete it, do a great job, and reapply. being a phd student can be a liabililty when applying to med school, but having one is a bonus.
also, although you probably don't want to hear it, you may want to do some heavy thinking about why you even want to go to medical school. perhaps it's best to just let go, and move on with your life. you sound like a very bright and hard-working person, so i'm sure you have some other, less taxing, less stressful options. who knows, maybe failing to gain admission to medical school is a blessing in disguise...
best of luck.