This is why universal RFID systems need to be employed.
http://www.rfidjournal.com/article/articleprint/2955/-1/1/
At our institution we stagger specimen... A breast biopsy is never accessioned sequentially with another breast specimen. You do breast then GI then prostate then skin etc....
This is a pain in the arse for the accessioner but helps to prevent switching a sequential cancer case with a benign one. A mix up scenario is as follows: a third shift tech prelabels slides to save time. He/She cuts one paraffin block and picks it up the section on the next patients (prelabeled) slide. The slide is stained and ends up in front of a busy pathologist who does not have time to scrutinize every single slide at the level of proper labeling. An absolute disaster ... a correct diagnosis is made for the wrong patient.
I think there should be universal RFID that follows the specimen throughout its travels... This includes integration of bar coding with everything from the clinicians office through processing, cutting, staining, and slides. A bar code and RFID system that will not let you even cut the paraffin block unless the numbers line up (with an activating scanner for the microtome). I also think this should all be linked to an intelligent history database that processes bits of pertinent history (preset by infromatics) about the patient so a barcode/RFID scan of the slide will bring up history, RADS, chemo, micro blah blah blah in an orderly way for the pathologist to read. Pathology processing, storing, and inventory of tissue in much more similar to a WALMART operations model than anything else in medicine.