I would say out of all your grades, the science prerequisite GPA matters the most since it determines how well you'll do in PT school. I read your other post concerning your low science pre-requisite GPA. Honestly, there are hundreds of schools, apply to ones that you meet their minimum. It sucks waiting a whole year. If I was you, I would research every single school and apply to ones who don't have a minimum prerequisite GPA or overall GPA.
http://aptaapps.apta.org/ptcas/programlist.aspx
Here's the list of schools.
Good luck.