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The quality of the education is probably similar, and as far as the application of the wholistic medicine and manipulation the DO residents I've seen aren't exactly bending over backwards to put it into practice. I'd go with the MD, because whatever your views are on the stigmata- just check out one of the oh, 9 million threads started on this- it exists and like it or not, there are career avenues open to you as an MD which can potentially be shut out as a DO. The fact is that many people view the DO route not as an alternate to an MD, but as an option of last resort forced upon a student by lack of allopathic acceptances- so they tend to extrapolate as to the academic strength of the candidate. So I think in terms of professional flexibility and to save yourself from a lifetime of explaining what those two letters mean and why you chose it, if I was in your position, I would without hesitation go the allopathic route.