Oh please. Your problem with modern medicine is that we don't have enough writers in the field and that physicians aren't spiritual or metaphysical enough? Tell me how that is going to improve patient care. Back in the day of the glorified intellectual physician there was so much less medical knowledge to have to understand that physicians could spend a ton of time writing, philosophizing, or whatever else moved them, but nowadays you have to work and study medicine constantly just to stay on top of your field. The medical literature doubles something like every 8 years now.
As far as the empathy thing, like I said before tell me how you would do it better if you were in admissions. It may be a little excessive the amount of volunteer work/dedication to service that is usually required to get in, but I still think empathy should be something that is taken into consideration into the admissions process.
You call medicine a "craft". You seem to have a problem with medicine slowly turning into a science, because it turns out a bunch of herd-following automaton physicians. I'm sorry, but that is the way the field has to go (not the automaton part, the science part). No matter how you want to practice your "craft," you are not doing what is best for your patients if you go against evidence-based practices for the sake of autonomy. Certainly there is still a place for clinical judgement, but I don't see what is wrong with an instruction manual for physicians that helps lay out best practices.