Ckent
The core procedure for an "indirect pulp capping", which was what seemed to be done in this situation, involves not removing all the decay. On top of this the Dr. would place Calcium hydroxide (Dycal probably) to iniatiate formation of stronger tooth structure (secondary dentin) which would stop the decay from developing further. On top of this, the Dr. would place a sedative intermediate filling, something like IRM, and check the carious lesion at a later date to see whether secondary dentin has formed. If it is hard, then the procedure was succefull, and the dentist can put a final restoration. If not, the Dr. would remove the decay, which may lead to a perfotation of the pulp chamber, leading to a root canal.
From what you desribed, putting Flouride onto the cavity does not seem to be a core procedure I am aware of. Flouride is used mainly to remineralize enamel, the outer tooth structure, help it become stronger, and stop bacteria from breaking down tooth structure. I have not heard of the use of Flouride on a cavity after it has been prepared. Can some one else shed some light on this matter?