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Do I think he should be thrown out of school? Probably not now, but next time.
I would rather he be remediated rather than thrown out too, and it does make it hard to tell the administration about things when there seems to be no middle ground in medical training between having no consequences and having your career ruined. That being said this is far enough over the line that I think most people would say something. At the very least I don't think its fair to blame the girl who is reporting him as though she did something wrong.