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I strongly disagree with the above advice. Don't talk about how nervous you are, as that's not going to make you sound any better, and they certainly already know and understand that you're nervous. One thing the interview process reveals is how candidates perform in situations where they are thinking on their feet and under some pressure. If you imply that you can't handle that, that's not good.
If you do feel the need to write a follow up email, just write again to thank him for taking the time to correspond and his concern and clarify that you are in fact very interested in research and the format of the program and that you are not looking for a clinical program.
In general in this process, it's a bad idea to highlight what you did "wrong." That's the best way to help someone focus on it and can make it the take-home message, when that's the last thing you want. It's like the people who go on about why their GRE scores or GPAs aren't exactly what they want them to be in their personal statements. That's not the story you want to be telling. Talk instead about what you do in fact want them to be thinking about (in this case, your interest in research/the program).
Edited to Add: If you want to briefly acknowledge you were momentarily confused before going on to explain what you do want out of a program, that seems reasonable to me. I just wouldn't go into why that happened or elaborate any further on it than that.
Easily recoverable--internship is a mandatory component of your training. You were somewhat concerned that the strongly research focused programs you're interested in might produce applicants who are less competitive for internship as a result of obtaining the extra research time that you want out of a training program. Done.
its a social health psych program not a clinical health psych program? no internships for social health psych?