swaamedic,
You are correct, the clinical courses are broken into their various specialties as they are taught to us. However, they also try to do the appropriate pathology with whatever we are covering in surg and Principles of Med (internal med). This is nice b/c they all kind of dovetail together. The Princ. of Med course has various subdivs. such as Nephrology, Endocrine, Rheumatology, and Geriatrics that we are covering this quarter with exams at the end of each set and a final at the end of the quarter.
Like Kelbel and Hskrmedic I would agree that the clinical courses and they way they are set up are very helpful for the integration in applying some of the basic sci from year one into a clinical framework. If you have any other questions don't hesitate to let me know.
Sweaty Paul MS-II
KCOM